Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor lepa | VDA_001260 | Not Available | Positive | 112325 - 113992 | 61310.8 |
| signal peptidase i | VDA_001261 | Not Available | Positive | 114141 - 115031 | 33159.2 |
| ribonuclease iii | VDA_001262 | Not Available | Positive | 115180 - 115716 | 19833.7 |
| gtp-binding protein era | VDA_001263 | Not Available | Positive | 115806 - 116618 | 31280.7 |
| dna recombination and repair protein reco | VDA_001264 | Not Available | Positive | 116628 - 117338 | 26835.8 |
| pyridoxine 5'-phosphate synthase | VDA_001265 | Not Available | Positive | 117335 - 118066 | 26485.9 |
| holo-[acyl-carrier protein] synthase | VDA_001266 | Not Available | Positive | 118066 - 118446 | 13856.8 |
| bara sensory histidine kinase | VDA_001267 | Not Available | Negative | 118560 - 121325 | 102849.0 |
| 23s rrna (uracil-5-)-methyltransferase ruma | VDA_001268 | Not Available | Positive | 121447 - 122772 | 49759.4 |
| gtp pyrophosphokinase (p)ppgpp synthetase i | VDA_001269 | Not Available | Positive | 122835 - 125054 | 83980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


