Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical vacj lipoprotein | VDA_002570 | Not Available | Negative | 1920910 - 1921713 | 29902.0 |
| cytochrome c heme lyase subunit ccmh | VDA_002571 | Not Available | Negative | 1921996 - 1923276 | 47486.0 |
| cytochrome c heme lyase subunit ccml | VDA_002572 | Not Available | Negative | 1923273 - 1923758 | 18200.7 |
| cytochrome c-type biogenesis protein ccmg/dsbe thiol:disulfide oxidoreductase | VDA_002573 | Not Available | Negative | 1923794 - 1924348 | 20918.4 |
| cytochrome c heme lyase subunit ccmf | VDA_002574 | Not Available | Negative | 1924360 - 1925973 | 59683.8 |
| cytochrome c-type biogenesis protein ccme heme chaperone | VDA_002575 | Not Available | Negative | 1926325 - 1926804 | 17570.5 |
| cytochrome c-type biogenesis protein ccmc | VDA_002576 | Not Available | Negative | 1927015 - 1927746 | 27673.3 |
| abc transporter involved in cytochrome c biogenesis ccmb subunit | VDA_002577 | Not Available | Negative | 1927972 - 1928640 | 23818.5 |
| abc transporter involved in cytochrome c biogenesis atpase component ccma | VDA_002578 | Not Available | Negative | 1928643 - 1929293 | 24181.0 |
| hypothetical protein | VDA_002579 | Not Available | Negative | 1929667 - 1929783 | 4455.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


