Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative adenine-specific methylase | VDA_002560 | Not Available | Negative | 1906388 - 1907320 | 35506.2 |
| hypothetical protein | VDA_002561 | Not Available | Positive | 1907374 - 1907904 | 20021.2 |
| hypothetical protein | VDA_002562 | Not Available | Negative | 1907999 - 1908298 | 10902.0 |
| peptidase insulinase family | VDA_002563 | Not Available | Positive | 1909299 - 1912064 | 106001.0 |
| enoyl-coa hydratase/delta(3)-cis-delta(2)-trans-enoyl-coa isomerase/3-hydroxyacyl-coa dehydrogenase/3-hydroxybutyryl-coa epimerase | VDA_002564 | Not Available | Negative | 1912141 - 1914261 | 77325.6 |
| 3-ketoacyl-coa thiolase | VDA_002565 | Not Available | Negative | 1914261 - 1915571 | 46502.1 |
| rna polymerase sigma-70 factor ecf subfamily | VDA_002566 | Not Available | Positive | 1916221 - 1916790 | 22345.5 |
| hypothetical protein | VDA_002567 | Not Available | Positive | 1916777 - 1917490 | 26104.2 |
| long-chain fatty acid transport protein | VDA_002568 | Not Available | Positive | 1917879 - 1919120 | 45030.8 |
| long-chain fatty acid transport protein | VDA_002569 | Not Available | Positive | 1919486 - 1920820 | 47493.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


