Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | VDA_001250 | Not Available | Positive | 99738 - 100943 | 44332.7 |
| hypothetical protein | VDA_001251 | Not Available | Positive | 102577 - 103050 | 16847.7 |
| hypothetical protein | VDA_001252 | Not Available | Positive | 103095 - 103241 | 5191.34 |
| hypothetical lysr-like regular protein | VDA_001253 | Not Available | Negative | 103333 - 104265 | 35534.9 |
| glycine cleavage t-protein | VDA_001254 | Not Available | Negative | 105375 - 106346 | 35673.1 |
| hypothetical protein | VDA_001255 | Not Available | Positive | 106615 - 106875 | 9871.9 |
| l-aspartate oxidase | VDA_001256 | Not Available | Negative | 107344 - 109074 | 64270.4 |
| rna polymerase sigma factor rpoe | VDA_001257 | Not Available | Positive | 109374 - 109952 | 21879.1 |
| sigma factor rpoe negative regulatory protein rsea | VDA_001258 | Not Available | Positive | 109976 - 110626 | 23594.6 |
| sigma factor rpoe negative regulatory protein rseb precursor | VDA_001259 | Not Available | Positive | 110626 - 111606 | 36580.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


