Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin 1 | VDA_002510 | Not Available | Positive | 1835788 - 1836315 | 19721.0 |
| ferric uptake regulation protein fur | VDA_002511 | Not Available | Positive | 1837085 - 1837531 | 16850.0 |
| glutaminyl-trna synthetase | VDA_002512 | Not Available | Negative | 1837817 - 1839484 | 63580.2 |
| beta-hexosaminidase | VDA_002513 | Not Available | Negative | 1839718 - 1842381 | 97991.4 |
| pts system n-acetylglucosamine-specific | VDA_002514 | Not Available | Negative | 1842553 - 1843980 | 50154.8 |
| glucosamine-6-phosphate deaminase | VDA_002515 | Not Available | Positive | 1844279 - 1845079 | 29980.6 |
| n-acetylglucosamine-6-phosphate deacetylase | VDA_002516 | Not Available | Positive | 1845139 - 1846233 | 39356.1 |
| n-acetylglucosamine-6p-responsive transcriptional repressor nagc rok family | VDA_002517 | Not Available | Positive | 1846237 - 1847451 | 44043.3 |
| putative glutathione-regulated potassium-efflux system protein kefb | VDA_002518 | Not Available | Positive | 1847741 - 1849330 | 57718.6 |
| asparagine synthetase | VDA_002519 | Not Available | Positive | 1849693 - 1851363 | 62665.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


