Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_002490 | Not Available | Negative | 1810363 - 1810968 | 23378.8 |
| hypothetical diadenosine tetraphosphate hydrolase | VDA_002491 | Not Available | Positive | 1811238 - 1811564 | 12242.7 |
| ferrous iron transport protein b | VDA_002492 | Not Available | Negative | 1811879 - 1814155 | 82972.0 |
| putative ferrous iron transport protein a | VDA_002493 | Not Available | Negative | 1814155 - 1814298 | 5161.55 |
| cell wall endopeptidase family m23/m37 | VDA_002494 | Not Available | Negative | 1814598 - 1815947 | 50139.1 |
| zinc abc transporter-binding protein znua | VDA_002495 | Not Available | Negative | 1815950 - 1816885 | 34656.9 |
| zinc abc transporter atp-binding protein znuc | VDA_002496 | Not Available | Positive | 1816982 - 1817731 | 27573.7 |
| zinc abc transporter permease protein znub | VDA_002497 | Not Available | Positive | 1817743 - 1818528 | 27864.6 |
| succinyl-coa ligase | VDA_002498 | Not Available | Negative | 1818617 - 1819489 | 29833.2 |
| succinyl-coa ligase | VDA_002499 | Not Available | Negative | 1819489 - 1820655 | 41344.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


