Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase amidotransferase subunit | VDA_002470 | Not Available | Positive | 1788414 - 1789040 | 22833.9 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | VDA_002471 | Not Available | Positive | 1789055 - 1789792 | 26462.5 |
| imidazole glycerol phosphate synthase cyclase subunit | VDA_002472 | Not Available | Positive | 1789802 - 1790575 | 28578.2 |
| phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp pyrophosphatase | VDA_002473 | Not Available | Positive | 1790572 - 1791192 | 22954.6 |
| thymidine kinase | VDA_002474 | Not Available | Negative | 1791534 - 1792112 | 21935.1 |
| na(+)/h(+) antiporter | VDA_002475 | Not Available | Negative | 1792266 - 1793903 | 58118.7 |
| dna-binding protein h-ns | VDA_002476 | Not Available | Positive | 1794523 - 1794918 | 14941.7 |
| membrane-bound lytic murein transglycosylase b | VDA_002477 | Not Available | Negative | 1795211 - 1796182 | 36497.3 |
| septum site-determining protein minc | VDA_002478 | Not Available | Positive | 1796678 - 1797340 | 23625.5 |
| septum site-determining protein mind | VDA_002479 | Not Available | Positive | 1797363 - 1798175 | 29470.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


