Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmannosamine-6-phosphate 2-epimerase | VDA_002440 | Not Available | Negative | 1751779 - 1752486 | 24748.8 |
| sialic acid utilization regulator rpir family | VDA_002441 | Not Available | Negative | 1752747 - 1753622 | 31294.5 |
| n-acetylneuraminate lyase | VDA_002442 | Not Available | Positive | 1753946 - 1754848 | 31985.4 |
| holliday junction dna helicase ruvb | VDA_002443 | Not Available | Negative | 1755023 - 1756033 | 37532.3 |
| holliday junction dna helicase ruva | VDA_002444 | Not Available | Negative | 1756052 - 1756615 | 20393.6 |
| crossover junction endodeoxyribonuclease ruvc | VDA_002445 | Not Available | Negative | 1756845 - 1757156 | 10681.1 |
| hypothetical protein | VDA_002446 | Not Available | Negative | 1757383 - 1758129 | 26408.8 |
| aspartyl-trna synthetase | VDA_002447 | Not Available | Negative | 1758361 - 1760139 | 66069.3 |
| hypothetical protein | VDA_002448 | Not Available | Positive | 1760382 - 1761278 | 34041.7 |
| trna (uridine-5-oxyacetic acid methyl ester) 34 synthase | VDA_002449 | Not Available | Positive | 1761450 - 1762178 | 27204.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


