Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythrose-4-phosphate dehydrogenase | VDA_001240 | Not Available | Positive | 87584 - 88666 | 40084.5 |
| phosphoglycerate kinase | VDA_001241 | Not Available | Positive | 88741 - 89904 | 40745.9 |
| fructose-bisphosphate aldolase class ii | VDA_001242 | Not Available | Positive | 90045 - 91121 | 38808.9 |
| hypothetical protein | VDA_001243 | Not Available | Positive | 91470 - 92354 | 31756.6 |
| hypothetical protein | VDA_001244 | Not Available | Positive | 93217 - 93945 | 26347.2 |
| d-3-phosphoglycerate dehydrogenase | VDA_001245 | Not Available | Negative | 94013 - 95242 | 44675.9 |
| ribose 5-phosphate isomerase a | VDA_001246 | Not Available | Negative | 95533 - 96192 | 23197.0 |
| 5-formyltetrahydrofolate cyclo-ligase | VDA_001247 | Not Available | Negative | 96394 - 96975 | 22493.2 |
| putative conserved exported protein precursor | VDA_001248 | Not Available | Positive | 98031 - 98504 | 17110.9 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | VDA_001249 | Not Available | Positive | 98548 - 99735 | 43215.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


