Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase catabolic | VDA_002374 | Not Available | Negative | 1657057 - 1659348 | 85382.4 |
| putrescine/proton symporter putrescine/ornithine antiporter pote | VDA_002375 | Not Available | Negative | 1659419 - 1660738 | 47006.1 |
| hypothetical protein | VDA_002376 | Not Available | Negative | 1661057 - 1661932 | 31493.9 |
| competence/damage-inducible protein cina | VDA_002377 | Not Available | Negative | 1662219 - 1663433 | 45528.9 |
| tyrosine-specific transport protein | VDA_002378 | Not Available | Positive | 1663777 - 1664994 | 43439.9 |
| hypothetical protein | VDA_002379 | Not Available | Positive | 1665231 - 1667207 | 74958.9 |
| hypothetical protein | VDA_002380 | Not Available | Negative | 1667349 - 1668545 | 45873.9 |
| regulatory protein cysb | VDA_002381 | Not Available | Negative | 1668723 - 1669697 | 36097.4 |
| atpase involved in dna repair | VDA_002382 | Not Available | Positive | 1669998 - 1670759 | 28980.2 |
| putative hydroxylase | VDA_002383 | Not Available | Positive | 1670835 - 1671620 | 30156.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


