Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001230 | Not Available | Negative | 76160 - 76861 | 25435.2 |
| twitching motility protein pilt | VDA_001231 | Not Available | Positive | 76884 - 77918 | 38183.1 |
| type iv pilus (tfp) assembly protein atpase component pilu | VDA_001232 | Not Available | Positive | 77930 - 79036 | 41357.0 |
| putative holliday junction resolvase | VDA_001233 | Not Available | Negative | 79364 - 79789 | 15721.7 |
| hypothetical protein | VDA_001234 | Not Available | Negative | 79786 - 80349 | 20515.2 |
| glutathione synthetase | VDA_001235 | Not Available | Negative | 80503 - 81450 | 35233.7 |
| ribosomal rna small subunit methyltransferase e | VDA_001236 | Not Available | Negative | 81471 - 82202 | 26990.6 |
| endonuclease i precursor | VDA_001237 | Not Available | Negative | 82334 - 83038 | 27155.6 |
| s-adenosylmethionine synthetase | VDA_001238 | Not Available | Negative | 83754 - 84908 | 42087.1 |
| transketolase | VDA_001239 | Not Available | Positive | 85326 - 87338 | 72598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


