Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpos | VDA_002318 | Not Available | Negative | 1569398 - 1570246 | 32434.0 |
| hexose phosphate uptake regulatory protein uhpc | VDA_002319 | Not Available | Negative | 1570501 - 1571832 | 49544.0 |
| sensor histidine protein kinase uhpb glucose-6-phosphate specific | VDA_002320 | Not Available | Negative | 1571848 - 1573380 | 57476.8 |
| transcriptional regulatory protein uhpa | VDA_002321 | Not Available | Negative | 1573380 - 1573988 | 21791.3 |
| hydroxyacylglutathione hydrolase | VDA_002322 | Not Available | Negative | 1574129 - 1574782 | 23838.3 |
| hypothetical outer membrane protein | VDA_002323 | Not Available | Negative | 1575197 - 1575754 | 20575.9 |
| l,d-transpeptidase ycbb | VDA_002324 | Not Available | Negative | 1575914 - 1577662 | 66908.4 |
| putative transcription regulator marr family protein | VDA_002325 | Not Available | Positive | 1578340 - 1578831 | 18460.3 |
| putative transcriptional regulator lysr family | VDA_002326 | Not Available | Positive | 1578961 - 1579776 | 29526.0 |
| trimethylamine-n-oxide reductase | VDA_002327 | Not Available | Negative | 1581195 - 1583675 | 93582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


