Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase | VDA_002298 | Not Available | Negative | 1545164 - 1546216 | 39448.5 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | VDA_002299 | Not Available | Positive | 1546400 - 1547677 | 47188.8 |
| hypothetical atp-dependent protease la (lon) domain protein | VDA_002300 | Not Available | Positive | 1547749 - 1548315 | 21686.8 |
| l-lactate permease | VDA_002301 | Not Available | Positive | 1548888 - 1550588 | 60884.3 |
| predicted l-lactate dehydrogenase fe-s oxidoreductase subunit ykge | VDA_002302 | Not Available | Positive | 1550944 - 1551489 | 19976.5 |
| predicted l-lactate dehydrogenase iron-sulfur cluster-binding subunit ykgf | VDA_002303 | Not Available | Positive | 1551552 - 1552916 | 50500.5 |
| predicted l-lactate dehydrogenase hypothetical protein subunit ykgg | VDA_002304 | Not Available | Positive | 1552931 - 1553680 | 27369.4 |
| transcriptional regulator lysr family | VDA_002305 | Not Available | Positive | 1553906 - 1554808 | 33425.1 |
| mlc transcriptional repressor of malt (the transcriptional activator of maltose regulon) and manxyz operon | VDA_002306 | Not Available | Negative | 1554891 - 1556105 | 44289.8 |
| queuosine biosynthesis quee radical sam | VDA_002307 | Not Available | Positive | 1556335 - 1557003 | 24580.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


