Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 68237 - 68312 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 68353 - 68428 | Not Available |
| hypothetical protein | VDA_001222 | Not Available | Negative | 68640 - 68912 | 10574.7 |
| a/g-specific adenine glycosylase | VDA_001223 | Not Available | Negative | 69026 - 70096 | 40461.7 |
| trna(m7g46)-methyltransferase | VDA_001224 | Not Available | Positive | 70304 - 71041 | 27786.4 |
| glutaminase | VDA_001225 | Not Available | Positive | 71160 - 72080 | 32949.8 |
| coproporphyrinogen iii oxidase, oxygen-independent | VDA_001226 | Not Available | Negative | 72606 - 73766 | 43513.5 |
| nucleoside 5-triphosphatase rdgb (dhaptp ditp xtp-specific) | VDA_001227 | Not Available | Negative | 73766 - 74359 | 21553.4 |
| membrane protein | VDA_001228 | Not Available | Negative | 74757 - 75314 | 20902.6 |
| pyrroline-5-carboxylate reductase | VDA_001229 | Not Available | Negative | 75326 - 76144 | 28581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


