Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type hemin transport system atpase component | VDA_002225 | Not Available | Positive | 1449865 - 1450662 | 28623.6 |
| purine nucleotide synthesis repressor | VDA_002226 | Not Available | Positive | 1451109 - 1452113 | 37578.4 |
| dna transformation protein tfox | VDA_002227 | Not Available | Positive | 1452647 - 1453237 | 22147.8 |
| hypothetical protein | VDA_002228 | Not Available | Positive | 1454090 - 1454674 | 22083.6 |
| dihydrolipoamide dehydrogenase | VDA_002229 | Not Available | Positive | 1454696 - 1456849 | 78487.9 |
| abc transporter substrate-binding protein ynjb | VDA_002230 | Not Available | Positive | 1456864 - 1458081 | 45417.9 |
| abc transporter permease protein ynjc | VDA_002231 | Not Available | Positive | 1458171 - 1459832 | 62614.1 |
| abc transporter atp-binding protein ynjd | VDA_002232 | Not Available | Positive | 1459834 - 1460466 | 23510.6 |
| putative cytochrome oxidase | VDA_002233 | Not Available | Positive | 1460554 - 1461168 | 22484.8 |
| hypothetical protein | VDA_002234 | Not Available | Negative | 1461165 - 1462067 | 34009.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


