Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical glutamate decarboxylase | VDA_002205 | Not Available | Positive | 1424641 - 1426290 | 61635.8 |
| torcad operon transcriptional regulatory protein torr | VDA_002206 | Not Available | Negative | 1426903 - 1427616 | 27276.1 |
| cytochrome c-type protein torc | VDA_002207 | Not Available | Positive | 1427866 - 1428984 | 41358.3 |
| trimethylamine-n-oxide reductase | VDA_002208 | Not Available | Positive | 1429059 - 1431590 | 93373.2 |
| chaperone protein tord | VDA_002209 | Not Available | Positive | 1431795 - 1432442 | 24366.1 |
| quinone-reactive ni/fe-hydrogenase small chain precursor | VDA_002210 | Not Available | Positive | 1432799 - 1433935 | 40914.1 |
| quinone-reactive ni/fe hydrogenase large subunit | VDA_002211 | Not Available | Positive | 1433939 - 1435642 | 62493.1 |
| quinone-reactive ni/fe hydrogenase cytochrome b subunit | VDA_002212 | Not Available | Positive | 1435655 - 1436359 | 27046.3 |
| hydrogenase maturation protease | VDA_002213 | Not Available | Positive | 1436362 - 1436907 | 20216.4 |
| protein hyde | VDA_002214 | Not Available | Positive | 1437376 - 1438626 | 47078.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


