Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine putrescine abc transporter permease component potb | VDA_002115 | Not Available | Positive | 1308654 - 1309511 | 32341.1 |
| spermidine putrescine abc transporter permease component potc | VDA_002116 | Not Available | Positive | 1309676 - 1310278 | 21572.5 |
| abc transporter periplasmic spermidine putrescine-binding protein potd | VDA_002117 | Not Available | Positive | 1310469 - 1311506 | 39055.4 |
| putrescine abc transporter putrescine-binding protein potf | VDA_002118 | Not Available | Positive | 1311878 - 1312921 | 39314.6 |
| hypothetical protein | VDA_002119 | Not Available | Negative | 1313058 - 1313312 | 8956.69 |
| nad-dependent protein deacetylase of sir2 family | VDA_002120 | Not Available | Negative | 1313497 - 1314213 | 26530.4 |
| formate dehydrogenase -o gamma subunit | VDA_002121 | Not Available | Negative | 1314424 - 1315461 | 39156.9 |
| formate dehydrogenase-o iron-sulfur subunit | VDA_002122 | Not Available | Negative | 1315580 - 1316203 | 22122.6 |
| formate dehydrogenase-o major subunit | VDA_002123 | Not Available | Negative | 1316215 - 1319076 | 106845.0 |
| hypothetical protein | VDA_002124 | Not Available | Negative | 1319092 - 1319292 | 7294.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


