Vibrio mimicus VM603

Gram-positiveCurved rodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mimicus VM603 is a Gram-positive, facultative anaerobic bacterium characterized by its curved rod shape. This organism exhibits motility, which may enhance its ability to navigate various environments. Notably, Vibrio mimicus VM603 possesses a single replicon, indicating a streamlined genomic structure that could influence its replication and adaptability. The classification of Vibrio mimicus as a facultative anaerobe suggests that it can thrive in both aerobic and anaerobic conditions, allowing it to exploit diverse ecological niches. Its motility may facilitate interactions with other microorganisms and host organisms, contributing to its ecological role and potential pathogenicity. The accession number ACYU00000000.1 provides a reference for researchers seeking genomic information about this bacterium, which can be crucial for understanding its biology and potential applications or implications in microbiological studies. In summary, Vibrio mimicus VM603's Gram-positive nature, curved rod shape, and motility, alongside its ability to thrive in varying oxygen conditions, highlight its adaptability. Such traits are important for its survival in different environments and could influence its interactions within microbial communities, as well as its potential impact on human health or aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mimicus
StrainVM603

Profile

Physiology
Gram staining propertiesPositive
ShapeCurved rod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mimicus VM603
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mimicus VM603 Cont488, whole genome shotgun sequence.

Gene Summary

Adenine Count

1155993 bp

Thymine Count

1174025 bp

Guanine Count

1025925 bp

Cytosine Count

994766 bp

Genome Length

4350709 bp

Protein-coding Genes

3763 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna delta(2)-isopentenylpyrophosphate transferaseVMB_18180Not AvailableNegative2133482 - 213442935554.8
conserved hypothetical proteinVMB_18190Not AvailableNegative2134426 - 213508824308.5
conserved hypothetical proteinVMB_18200Not AvailableNegative2135234 - 213638842910.3
n-acetylmuramoyl-l-alanine amidaseVMB_18210Not AvailableNegative2136395 - 213814963751.6
conserved hypothetical proteinVMB_18220Not AvailableNegative2138116 - 213858017265.3
iron-sulfur cluster-binding proteinVMB_18230Not AvailablePositive2138785 - 213989441864.2
Trna-metNot AvailableNot AvailablePositive2140468 - 2140544Not Available
Trna-metNot AvailableNot AvailablePositive2140587 - 2140663Not Available
Trna-metNot AvailableNot AvailablePositive2140706 - 2140782Not Available
Trna-glnNot AvailableNot AvailablePositive2140859 - 2140933Not Available

Displaying genes 1861 – 1870 of 3832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

296 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 296 metabolites

Health Effects

No health effects information available for this bacterium.