Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. 31_2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1307919 bp
Thymine Count
1372632 bp
Guanine Count
1159299 bp
Cytosine Count
1047323 bp
Genome Length
4887173 bp
Protein-coding Genes
4498 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | HMPREF1002_03290 | Not Available | Negative | 4246065 - 4246373 | 11471.9 |
| hydrogenase expression/formation protein hypd | HMPREF1002_03291 | Not Available | Negative | 4246380 - 4247459 | 40170.8 |
| hydrogenase assembly chaperone hypc/hupf | HMPREF1002_03292 | Not Available | Negative | 4247447 - 4247680 | 8462.45 |
| carbamoyltransferase hypf | HMPREF1002_03293 | Not Available | Positive | 4247840 - 4250122 | 85574.0 |
| hydrogenase nickel insertion protein hypa | HMPREF1002_03294 | Not Available | Positive | 4250135 - 4250482 | 12795.6 |
| hydrogenase accessory protein hypb | HMPREF1002_03295 | Not Available | Positive | 4250512 - 4251264 | 28088.4 |
| hypothetical protein | HMPREF1002_03296 | Not Available | Positive | 4251280 - 4253403 | 77293.0 |
| hypothetical protein | HMPREF1002_03297 | Not Available | Negative | 4253466 - 4254083 | 23510.7 |
| Trna-ser | Not Available | Not Available | Positive | 4254219 - 4254308 | Not Available |
| upf0755 protein | HMPREF1002_03298 | Not Available | Positive | 4254415 - 4255497 | 41480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


