Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein [thioclava pacifica] | - | O69717 | Negative | 592766 - 593230 | 17051.5 |
| smc-scp complex subunit scpb [puniceibacterium confluentis] | - | Not Available | Negative | 593364 - 593960 | 21799.1 |
| duf1403 family protein [puniceibacterium sediminis] | - | Not Available | Negative | 593963 - 594847 | 31669.3 |
| tyrosine-type recombinase/integrase [roseovarius azorensis] | - | Not Available | Positive | 595269 - 596294 | 38011.5 |
| putative replication protein c [octadecabacter antarcticus] | - | Not Available | Negative | 596307 - 596639 | 11889.2 |
| is66 family transposase [puniceibacterium antarcticum] | - | Not Available | Negative | 596676 - 597191 | 19225.9 |
| is66 family insertion sequence element accessory protein tnpb [marivita cryptomonadis] | - | Not Available | Negative | 597256 - 597609 | 13151.4 |
| is66 family insertion sequence hypothetical protein [jannaschia seosinensis] | - | Not Available | Negative | 597606 - 598034 | 14851.4 |
| isl3 family transposase [salipiger mucosus] | - | Not Available | Positive | 598283 - 599020 | 27300.1 |
| isl3 family transposase [salipiger mucosus] | - | Not Available | Positive | 599102 - 599788 | 25290.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
