Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease [pseudaestuariivita atlantica] | - | D4GPW1 | Negative | 538127 - 539047 | 31615.8 |
| abc transporter permease [planktomarina temperata] | - | D4GPW2 | Negative | 539047 - 540129 | 38381.1 |
| abc transporter atp-binding protein [rhodovulum steppense] | - | D4GPW3 | Negative | 540247 - 541767 | 53894.1 |
| xanthine dehydrogenase accessory protein xdhc [tritonibacter horizontis] | - | Not Available | Negative | 541764 - 542720 | 34280.5 |
| xanthine dehydrogenase molybdopterin binding subunit [roseobacter litoralis] | - | P10351 | Negative | 542689 - 545058 | 84394.8 |
| xanthine dehydrogenase small subunit [leisingera daeponensis] | - | Q54FB7 | Negative | 545055 - 545924 | 31185.1 |
| phosphoethanolamine--lipid a transferase [pseudophaeobacter arcticus] | - | P30845 | Negative | 546063 - 547766 | 62421.5 |
| response regulator transcription factor [silicimonas algicola] | - | Q44006 | Positive | 547924 - 548595 | 25119.2 |
| hamp domain-containing histidine kinase [pseudophaeobacter arcticus] | - | A0QR01 | Positive | 548660 - 549970 | 47737.5 |
| is21 family transposase [leisingera caerulea] | - | P0A134 | Negative | 550132 - 550632 | 18219.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
