Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit [pannonibacter indicus] | - | Not Available | Negative | 518660 - 519961 | 44793.2 |
| trap transporter small permease [tritonibacter horizontis] | - | Not Available | Negative | 519973 - 520488 | 18526.3 |
| trap transporter substrate-binding protein dctp [roseivivax sediminis] | - | P43020 | Positive | 520746 - 521720 | 34831.1 |
| glycoside hydrolase family 2 [martelella lutilitoris] | - | P05804 | Positive | 521739 - 523550 | 68646.7 |
| fcd domain-containing protein [epibacterium ulvae] | - | P39161 | Positive | 523547 - 524278 | 27681.8 |
| mannonate dehydratase [epibacterium scottomollicae] | - | B7LQG3 | Positive | 524345 - 525514 | 42709.8 |
| duf1153 domain-containing protein [litoreibacter arenae] | - | Not Available | Negative | 526397 - 526681 | 10798.8 |
| abc transporter atp-binding protein [natronohydrobacter thiooxidans] | - | Q81LM1 | Negative | 526981 - 527652 | 24113.2 |
| iron abc transporter permease [afifella aestuarii] | - | B0R5G3 | Negative | 527738 - 528643 | 30564.2 |
| abc transporter substrate-binding protein [martelella limonii] | - | Not Available | Negative | 528779 - 529789 | 36520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
