Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase [paenirhodobacter enshiensis] | - | P37171 | Negative | 422017 - 422553 | 20001.1 |
| type ii toxin-antitoxin system rata family toxin [donghicola tyrosinivorans] | - | Q8FEY4 | Positive | 422655 - 423074 | 15997.2 |
| cina family protein [tritonibacter horizontis] | - | P51967 | Negative | 423109 - 423588 | 16132.3 |
| phosphatidylglycerophosphatase a [epibacterium mobile] | - | P18200 | Negative | 423585 - 424082 | 17470.7 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase [epibacterium mobile] | - | Q1GGW9 | Negative | 424079 - 425227 | 40697.7 |
| trna dihydrouridine synthase dusb [ruegeria conchae] | - | Q08111 | Positive | 425422 - 426408 | 34907.9 |
| pas domain-containing protein [phaeobacter gallaeciensis] | - | P09431 | Positive | 426405 - 427493 | 39240.1 |
| response regulator [phaeobacter gallaeciensis] | - | P09432 | Positive | 427511 - 428890 | 50436.1 |
| pas domain-containing sensor histidine kinase [epibacterium multivorans] | - | Q04850 | Positive | 428999 - 431269 | 84140.2 |
| sigma-54-dependent fis family transcriptional regulator [roseivivax isoporae] | - | Q04849 | Positive | 431266 - 432684 | 52417.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
