Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12-dependent ribonucleotide reductase [aliiroseovarius crassostreae] | - | Q89MB9 | Positive | 4518601 - 4518735 | 4630.47 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Positive | 4519300 - 4519680 | 13228.2 |
| cysteine--trna ligase [leisingera caerulea] | - | Q1GHI0 | Positive | 4519918 - 4521291 | 50184.6 |
| citramalate synthase [celeribacter manganoxidans] | - | O66682 | Positive | 4521288 - 4522916 | 58639.3 |
| squalene/phytoene synthase family protein [epibacterium mobile] | - | Not Available | Positive | 4522906 - 4523682 | 28337.8 |
| mfs transporter [pelagicola litorisediminis] | - | A6X7E7 | Negative | 4523705 - 4524928 | 41655.9 |
| dna-3-methyladenine glycosylase 2 family protein [leisingera caerulea] | - | Not Available | Positive | 4524974 - 4525639 | 24394.4 |
| prolyl oligopeptidase family serine peptidase [roseovarius salinarum] | - | Q4I8Q4 | Positive | 4525636 - 4526301 | 23528.2 |
| pseudouridine synthase [tritonibacter horizontis] | - | Q9HX48 | Negative | 4526304 - 4526987 | 25678.8 |
| hnh endonuclease [rhodobacteraceae bacterium bh-sd16] | - | Not Available | Positive | 4527233 - 4527817 | 22290.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
