Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [marinicella sediminis] | - | P36683 | Positive | 4373865 - 4376654 | 100775.0 |
| hamp domain-containing protein [epibacterium scottomollicae] | - | Not Available | Positive | 4376988 - 4379378 | 85776.9 |
| pas domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 4380035 - 4383760 | 138687.0 |
| response regulator [epibacterium mobile] | - | Not Available | Positive | 4383775 - 4384158 | 14448.3 |
| transporter substrate-binding domain-containing protein [epibacterium mobile] | - | Q9R6X3 | Positive | 4384160 - 4386529 | 85781.5 |
| response regulator [epibacterium mobile] | - | Q53228 | Positive | 4386526 - 4386921 | 14428.4 |
| porin [epibacterium multivorans] | - | Not Available | Positive | 4387351 - 4388472 | 39789.1 |
| trigger factor [roseovarius nitratireducens] | - | Q1GHV0 | Positive | 4388770 - 4390101 | 49143.7 |
| ggdef domain-containing protein [epibacterium mobile] | - | Q8X8Q3 | Positive | 4390538 - 4391479 | 34130.2 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [ruegeria halocynthiae] | - | Not Available | Negative | 4391535 - 4393493 | 70017.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
