Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing hybrid sensor histidine kinase/response regulator [epibacterium scottomollicae] | - | P58363 | Positive | 4301759 - 4304236 | 90275.4 |
| site-specific integrase [epibacterium scottomollicae] | - | Not Available | Negative | 4305622 - 4305891 | 10118.4 |
| is3 family transposase [sulfitobacter mediterraneus] | - | Not Available | Negative | 4306204 - 4307025 | 31844.1 |
| is3 family transposase [sulfitobacter mediterraneus] | - | P17985 | Negative | 4307049 - 4307315 | 10180.5 |
| site-specific integrase [epibacterium scottomollicae] | - | Not Available | Negative | 4307378 - 4307716 | 13028.5 |
| trna dihydrouridine(20/20a) synthase dusa [leisingera aquimarina] | - | Q9KUX9 | Positive | 4307811 - 4308821 | 36748.3 |
| hypothetical protein [epibacterium scottomollicae] | - | Not Available | Positive | 4308830 - 4309621 | 29482.9 |
| duf1289 domain-containing protein [epibacterium scottomollicae] | - | Not Available | Negative | 4309738 - 4309974 | 8896.88 |
| holliday junction resolvase ruvx [rhodovulum strictum] | - | Q1GI16 | Negative | 4309978 - 4310451 | 17287.8 |
| c-type cytochrome biogenesis protein ccmi [epibacterium scottomollicae] | - | P45399 | Negative | 4310448 - 4311689 | 44364.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
