Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter permease [stappia indica] | - | Not Available | Positive | 4141755 - 4143251 | 50994.2 |
| peptidase c1 [epibacterium mobile] | - | Not Available | Positive | 4143680 - 4145449 | 63136.0 |
| ompa family protein [epibacterium mobile] | - | P65594 | Positive | 4145469 - 4150322 | 181151.0 |
| lysr family transcriptional regulator [epibacterium mobile] | - | P55576 | Negative | 4150363 - 4151250 | 32429.0 |
| gmc family oxidoreductase n-terminal domain-containing protein [phaeobacter gallaeciensis] | - | Q47944 | Positive | 4151368 - 4152978 | 58069.6 |
| mandelate racemase/muconate lactonizing enzyme family protein [phaeobacter porticola] | - | D4GJ14 | Positive | 4152975 - 4154150 | 43408.3 |
| aldehyde dehydrogenase family protein [epibacterium mobile] | - | P56533 | Positive | 4154147 - 4155631 | 51637.2 |
| hlyd family type i secretion periplasmic adaptor subunit [octadecabacter temperatus] | - | Not Available | Negative | 4155682 - 4157022 | 49567.6 |
| type i secretion system permease/atpase [sulfitobacter sp. hsms-29] | - | Not Available | Negative | 4157015 - 4159048 | 72119.6 |
| type i secretion protein atpase [epibacterium scottomollicae] | - | Not Available | Negative | 4159067 - 4161112 | 72371.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
