Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein [nisaea denitrificans] | - | Not Available | Positive | 3594147 - 3594983 | 31052.2 |
| amp-binding protein [shimia marina] | - | P76085 | Positive | 3595000 - 3596217 | 42869.4 |
| iron abc transporter permease [phaeobacter inhibens] | - | P71338 | Positive | 3596343 - 3598022 | 59986.6 |
| gtp-binding protein [epibacterium mobile] | - | P31521 | Negative | 3598031 - 3598894 | 30761.9 |
| fe(3+) abc transporter substrate-binding protein [sulfitobacter noctilucicola] | - | P72827 | Negative | 3599281 - 3600291 | 36604.6 |
| multispecies: 50s ribosomal protein l36 [rhodobacteraceae] | - | Q1GKF8 | Negative | 3600575 - 3600700 | 5012.31 |
| Trna-val | Not Available | Not Available | Positive | 3600782 - 3600856 | Not Available |
| n-formylglutamate amidohydrolase [epibacterium mobile] | - | Not Available | Positive | 3601014 - 3601874 | 31686.7 |
| dna polymerase iv [phaeobacter italicus] | - | Q92QM8 | Negative | 3601884 - 3603155 | 46977.7 |
| nudix domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 3603258 - 3603677 | 15728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
