Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease [pseudophaeobacter leonis] | - | O35024 | Positive | 3572633 - 3573835 | 42090.6 |
| metal abc transporter permease [pelagicola litoralis] | - | O34500 | Positive | 3573836 - 3574762 | 31751.8 |
| dna mismatch repair endonuclease mutl [epibacterium mobile] | - | B4RA70 | Positive | 3574853 - 3576784 | 68925.1 |
| dna recombination protein rmuc [tritonibacter horizontis] | - | Q9PG89 | Positive | 3576796 - 3578031 | 45358.4 |
| adenylate/guanylate cyclase domain-containing protein [tritonibacter horizontis] | - | P40137 | Positive | 3578028 - 3579344 | 48883.1 |
| duf3775 domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 3579424 - 3579747 | 11585.6 |
| saccharopine dehydrogenase nadp-binding domain-containing protein [salinihabitans flavidus] | - | Q9P4R4 | Negative | 3579806 - 3580948 | 42035.6 |
| saccharopine dehydrogenase [pelagicola litoralis] | - | P38997 | Negative | 3580978 - 3582030 | 37545.4 |
| glutathione s-transferase family protein [epibacterium ulvae] | - | P0A9D3 | Negative | 3582042 - 3582656 | 22443.2 |
| histidine phosphatase family protein [epibacterium mobile] | - | Not Available | Negative | 3582679 - 3583335 | 24254.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
