Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b [fluviibacterium aquatile] | - | P05418 | Positive | 3200342 - 3201670 | 50040.6 |
| cytochrome c [ruegeria profundi] | - | P13627 | Positive | 3201689 - 3202480 | 28319.7 |
| aaa family atpase [epibacterium mobile] | - | Q56148 | Negative | 3202623 - 3203144 | 18883.4 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))-methylthiotransferase mtab [oceanibium sediminis] | - | Q9ZDB6 | Negative | 3203164 - 3204366 | 44359.4 |
| diaminopimelate epimerase [epibacterium mobile] | - | Q3IZB6 | Negative | 3204427 - 3205254 | 29738.3 |
| Trna-lys | Not Available | Not Available | Positive | 3205503 - 3205578 | Not Available |
| helix-turn-helix transcriptional regulator [epibacterium mobile] | - | Not Available | Positive | 3206593 - 3206907 | 11727.4 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Negative | 3207306 - 3207746 | 16555.8 |
| hypothetical protein [epibacterium scottomollicae] | - | Not Available | Positive | 3208112 - 3208726 | 22499.7 |
| hypothetical protein [epibacterium scottomollicae] | - | Not Available | Negative | 3209076 - 3209981 | 33903.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
