Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein [epibacterium mobile] | - | Not Available | Positive | 3011747 - 3012580 | 29970.4 |
| 5-dehydro-2-deoxygluconokinase [phaeobacter italicus] | - | A7ZAH9 | Positive | 3012580 - 3014493 | 70065.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [ruegeria halocynthiae] | - | Q5KYR0 | Positive | 3014490 - 3016319 | 65125.6 |
| myo-inosose-2 dehydratase [limimaricola pyoseonensis] | - | P49304 | Positive | 3016394 - 3017326 | 34302.4 |
| 5-deoxy-glucuronate isomerase [aureimonas jatrophae] | - | Q5KYR2 | Positive | 3017359 - 3018165 | 29739.0 |
| p1 family peptidase [epibacterium mobile] | - | A0MTQ2 | Negative | 3018248 - 3019348 | 38846.3 |
| abc transporter permease [epibacterium mobile] | - | P0AFK8 | Negative | 3019348 - 3020199 | 31309.3 |
| abc transporter permease [epibacterium mobile] | - | P0AFK4 | Negative | 3020199 - 3021089 | 32950.8 |
| abc transporter atp-binding protein [epibacterium mobile] | - | Q98HF7 | Negative | 3021089 - 3022174 | 39676.9 |
| spermidine/putrescine abc transporter substrate-binding protein [epibacterium mobile] | - | Q9I6J0 | Negative | 3022231 - 3023262 | 37879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
