Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1013 domain-containing protein [salinihabitans flavidus] | - | Not Available | Positive | 3001915 - 3002682 | 28118.9 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Positive | 3002891 - 3003391 | 18258.8 |
| 3-mercaptopyruvate sulfurtransferase [rhodosalinus sediminis] | - | O64530 | Positive | 3003521 - 3004372 | 31029.8 |
| aspartate/tyrosine/aromatic aminotransferase [ruegeria pomeroyi] | - | P95468 | Positive | 3004376 - 3005560 | 42968.8 |
| tim barrel protein [verminephrobacter eiseniae] | - | Q5T013 | Negative | 3005634 - 3006410 | 27962.5 |
| inositol 2-dehydrogenase [puniceibacterium antarcticum] | - | O68965 | Negative | 3006414 - 3007415 | 35313.3 |
| gfo/idh/moca family oxidoreductase [fulvimarina sp. 85] | - | P74041 | Negative | 3007440 - 3008555 | 39835.3 |
| murr/rpir family transcriptional regulator [epibacterium mobile] | - | Not Available | Positive | 3008636 - 3009466 | 30096.0 |
| sugar abc transporter substrate-binding protein [notoacmeibacter ruber] | - | Q4J710 | Positive | 3009622 - 3010548 | 31611.4 |
| abc transporter permease [mangrovicoccus ximenensis] | - | Q4J711 | Positive | 3010639 - 3011745 | 38599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
