Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel [epibacterium scottomollicae] | - | Q57362 | Negative | 2909584 - 2910975 | 51080.8 |
| 3-isopropylmalate dehydratase large subunit [roseibacterium elongatum] | - | Q1GDM6 | Positive | 2911260 - 2912663 | 50270.8 |
| 3-isopropylmalate dehydratase small subunit [ruegeria pomeroyi] | - | Q1GDM5 | Positive | 2912676 - 2913281 | 22508.9 |
| phenylalanine--trna ligase subunit alpha [albimonas pacifica] | - | Q1GDM3 | Negative | 2913690 - 2914763 | 39903.6 |
| adenylate cyclase [tritonibacter horizontis] | - | Q9Z3Q0 | Positive | 2914990 - 2915973 | 35823.1 |
| multispecies: 50s ribosomal protein l20 [rhodobacteraceae] | - | Q1GDM1 | Negative | 2916103 - 2916468 | 13645.5 |
| 50s ribosomal protein l35 [pseudooceanicola antarcticus] | - | Q1GDM0 | Negative | 2916484 - 2916684 | 7379.31 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Negative | 2916801 - 2917022 | 7735.64 |
| pyruvate kinase [donghicola tyrosinivorans] | - | O05118 | Negative | 2917060 - 2918505 | 51673.0 |
| duf2189 domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 2918987 - 2919853 | 30867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
