Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate 3-monooxygenase [salinihabitans flavidus] | - | P00438 | Positive | 2592838 - 2594007 | 43759.9 |
| 3-oxoadipate enol-lactonase [epibacterium mobile] | - | P00632 | Positive | 2594007 - 2594795 | 27948.4 |
| 4-carboxymuconolactone decarboxylase [paracoccus jeotgali] | - | P20370 | Positive | 2594788 - 2595192 | 14867.6 |
| protocatechuate 3,4-dioxygenase subunit beta [limimaricola soesokkakensis] | - | P00437 | Positive | 2595189 - 2595911 | 27154.5 |
| protocatechuate 3,4-dioxygenase subunit alpha [celeribacter manganoxidans] | - | P20371 | Positive | 2595914 - 2596531 | 22587.7 |
| 3-keto-5-aminohexanoate cleavage protein [mangrovicoccus ximenensis] | - | B0VHH0 | Positive | 2596541 - 2597374 | 30121.9 |
| 3-carboxy-cis,cis-muconate cycloisomerase [epibacterium mobile] | - | Q9I6Q8 | Positive | 2597414 - 2598487 | 37855.5 |
| duf4394 domain-containing protein [stappia indica] | - | Not Available | Positive | 2598614 - 2599414 | 27775.0 |
| sigma-70 family rna polymerase sigma factor [epibacterium mobile] | - | Not Available | Positive | 2599690 - 2600220 | 19978.2 |
| hypothetical protein [epibacterium scottomollicae] | - | Not Available | Positive | 2600401 - 2600955 | 19348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
