Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase [planktomarina temperata] | - | A1JRS8 | Positive | 2239350 - 2240195 | 29886.1 |
| hypothetical protein [epibacterium scottomollicae] | - | Not Available | Positive | 2240301 - 2241077 | 28901.1 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Negative | 2241204 - 2242475 | 43302.3 |
| lrp/asnc family transcriptional regulator [epibacterium mobile] | - | Q44333 | Negative | 2242592 - 2242966 | 13512.0 |
| duf2937 family protein [epibacterium mobile] | - | Not Available | Positive | 2243327 - 2243839 | 17911.9 |
| lipoprotein-releasing abc transporter permease subunit [ruegeria halocynthiae] | - | P57061 | Positive | 2243928 - 2245211 | 45818.7 |
| abc transporter atp-binding protein [nioella sediminis] | - | Q1GFI8 | Positive | 2245204 - 2245887 | 24135.1 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Negative | 2246045 - 2246791 | 28084.0 |
| hypothetical protein [epibacterium mobile] | - | Not Available | Positive | 2247451 - 2249076 | 57539.2 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein [paracoccus kondratievae] | - | P54528 | Negative | 2249087 - 2250001 | 32557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
