Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multispecies: energy-dependent translational throttle protein etta [ruegeria] | - | A0A0H2VFI8 | Positive | 1851123 - 1852790 | 62074.6 |
| duf4935 domain-containing protein [roseobacter litoralis] | - | Not Available | Positive | 1852843 - 1853820 | 36619.4 |
| atp-binding cassette domain-containing protein [epibacterium scottomollicae] | - | P76909 | Negative | 1853891 - 1854526 | 22885.0 |
| abc transporter permease [epibacterium mobile] | - | P76224 | Negative | 1854519 - 1856216 | 60463.3 |
| abc transporter substrate-binding protein [tritonibacter horizontis] | - | P76223 | Negative | 1856236 - 1857435 | 43898.4 |
| quinolinate synthase nada [pseudophaeobacter arcticus] | - | C3M8U4 | Positive | 1857751 - 1858806 | 38588.3 |
| l-aspartate oxidase [epibacterium mobile] | - | Q92R32 | Positive | 1858814 - 1860409 | 55094.6 |
| carboxylating nicotinate-nucleotide diphosphorylase [epibacterium mobile] | - | P77938 | Positive | 1860406 - 1861254 | 29655.9 |
| lysr family transcriptional regulator [epibacterium mobile] | - | P43011 | Negative | 1861251 - 1862183 | 33670.6 |
| multispecies: nuclear transport factor 2 family protein [cobetia] | - | Not Available | Positive | 1862313 - 1862786 | 18630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
