Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paax family transcriptional regulator [epibacterium mobile] | - | Not Available | Negative | 1718924 - 1719781 | 31330.6 |
| phenylacetic acid degradation bifunctional protein paaz [ruegeria lacuscaerulensis] | - | P77455 | Negative | 1719826 - 1721856 | 72055.9 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase [epibacterium mobile] | - | P77467 | Positive | 1722012 - 1722797 | 27623.0 |
| hydroxyphenylacetyl-coa thioesterase paai [tritonibacter horizontis] | - | P76084 | Positive | 1722801 - 1723256 | 16210.3 |
| phenylacetate--coa ligase [pseudophaeobacter arcticus] | - | Q9L9C1 | Positive | 1723292 - 1724602 | 48502.3 |
| tetr/acrr family transcriptional regulator [epibacterium mobile] | - | Not Available | Positive | 1724609 - 1725205 | 22413.9 |
| glycine zipper 2tm domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 1725486 - 1725749 | 8231.67 |
| ompa family protein [epibacterium scottomollicae] | - | Not Available | Negative | 1725844 - 1727718 | 65614.4 |
| tryptophan--trna ligase [salinihabitans flavidus] | - | Q92SI9 | Negative | 1727852 - 1728880 | 37989.6 |
| rhomboid family intramembrane serine protease [epibacterium mobile] | - | Not Available | Positive | 1728995 - 1729681 | 24646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
