Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi [oceaniglobus indicus] | - | Q1GDG1 | Negative | 70573 - 71058 | 17370.6 |
| class i sam-dependent methyltransferase [epibacterium mobile] | - | Not Available | Negative | 71051 - 71650 | 21635.4 |
| duf3429 domain-containing protein [epibacterium mobile] | - | Not Available | Negative | 71647 - 72105 | 16437.9 |
| beta-glucosidase [phaeobacter italicus] | - | Q08638 | Negative | 72105 - 73352 | 45245.9 |
| laci family dna-binding transcriptional regulator [epibacterium mobile] | - | Q9Z3R4 | Negative | 73357 - 74388 | 37720.0 |
| carbohydrate abc transporter substrate-binding protein [epibacterium ulvae] | - | Q9Z3R5 | Positive | 74659 - 76008 | 48399.5 |
| sugar abc transporter permease [marivivens niveibacter] | - | Q9Z3R6 | Positive | 76121 - 77128 | 37424.7 |
| carbohydrate abc transporter permease [yoonia sediminilitoris] | - | Q9Z3R7 | Positive | 77142 - 78290 | 41424.7 |
| duf3459 domain-containing protein [tateyamaria omphalii] | - | Q9Z3R8 | Positive | 78336 - 79988 | 61472.7 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc [rhodobacteraceae bacterium bh-sd16] | - | Q9Z3R9 | Positive | 80008 - 81105 | 39338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
