Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase [sphingomonas prati] | - | O67716 | Positive | 1427175 - 1428197 | 37561.7 |
| duf4139 domain-containing protein [epibacterium scottomollicae] | - | Not Available | Positive | 1428363 - 1430009 | 60135.6 |
| hypothetical protein [tritonibacter horizontis] | - | Not Available | Positive | 1430176 - 1430499 | 12174.7 |
| amidohydrolase [epibacterium mobile] | - | Not Available | Positive | 1430637 - 1432589 | 70112.9 |
| hpch/hpai aldolase/citrate lyase family protein [epibacterium scottomollicae] | - | A8A876 | Negative | 1432639 - 1433403 | 26826.2 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase [pseudodonghicola xiamenensis] | - | P42270 | Negative | 1433416 - 1434216 | 28628.2 |
| fumarylacetoacetate hydrolase family protein [parasedimentitalea marina] | - | B2RYW9 | Negative | 1434213 - 1435070 | 31532.4 |
| aspartate aminotransferase family protein [ruegeria arenilitoris] | - | Q8RY79 | Negative | 1435070 - 1436482 | 52123.8 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase [sulfitobacter mediterraneus] | - | P31003 | Negative | 1436560 - 1437540 | 37090.9 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase [shimia abyssi] | - | P42269 | Negative | 1437639 - 1439150 | 54358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
