Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit [granulosicoccus antarcticus] | - | Not Available | Negative | 1048390 - 1049940 | 54021.7 |
| trap transporter small permease subunit [hoeflea phototrophica] | - | Not Available | Negative | 1049937 - 1050434 | 18339.1 |
| trap transporter substrate-binding protein [caenispirillum salinarum] | - | Q8YSQ6 | Negative | 1050506 - 1051591 | 38862.2 |
| utra domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 1051795 - 1052496 | 26879.1 |
| alcohol dehydrogenase catalytic domain-containing protein [ruegeria sediminis] | - | P80094 | Positive | 1052711 - 1053970 | 43737.7 |
| mandelate racemase/muconate lactonizing enzyme family protein [roseivivax pacificus] | - | Q6L1T2 | Positive | 1053954 - 1055039 | 39032.6 |
| helix-turn-helix transcriptional regulator [tritonibacter horizontis] | - | P52695 | Positive | 1055244 - 1055561 | 11562.1 |
| fumarylacetoacetate hydrolase family protein [epibacterium mobile] | - | A9ALD1 | Negative | 1055599 - 1056447 | 30116.0 |
| cyclic nucleotide-binding domain-containing protein [ruegeria pomeroyi] | - | Q46Y89 | Negative | 1056520 - 1059615 | 115312.0 |
| duf3307 domain-containing protein [epibacterium mobile] | - | Not Available | Positive | 1059809 - 1060198 | 14704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
