Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TrichCH4B |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957076 bp
Thymine Count
967594 bp
Guanine Count
1397752 bp
Cytosine Count
1348545 bp
Genome Length
4670967 bp
Protein-coding Genes
4249 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallopeptidase [roseobacter litoralis] | - | Not Available | Negative | 969211 - 970602 | 50345.3 |
| gamma-glutamyltransferase [roseovarius atlanticus] | - | Q05053 | Negative | 970599 - 972164 | 54814.9 |
| abc transporter atp-binding protein [roseovarius marisflavi] | - | Q53194 | Negative | 972161 - 973144 | 35326.9 |
| abc transporter atp-binding protein [sulfitobacter geojensis] | - | Not Available | Negative | 973141 - 974136 | 35834.8 |
| abc transporter permease [pseudodonghicola xiamenensis] | - | P51000 | Negative | 974140 - 975036 | 31696.0 |
| abc transporter permease [roseovarius nubinhibens] | - | Q6D3B1 | Negative | 975038 - 975955 | 33148.4 |
| abc transporter substrate-binding protein [pseudorhodobacter aquimaris] | - | P33950 | Negative | 976058 - 977581 | 56933.6 |
| helix-turn-helix domain-containing protein [epibacterium scottomollicae] | - | Not Available | Positive | 977735 - 978496 | 27888.5 |
| response regulator [epibacterium scottomollicae] | - | Q48IV1 | Negative | 978532 - 981033 | 91172.0 |
| response regulator transcription factor [salipiger bermudensis] | - | Q9HUI2 | Negative | 981040 - 981762 | 26989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
