Dethiobacter alkaliphilus AHT 1

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Dethiobacteria

Order

Dethiobacterales

Family

Dethiobacteraceae

Genus

Dethiobacter

Description

Dethiobacter alkaliphilus AHT 1 is an anaerobic bacterium characterized by its ability to thrive in environments devoid of oxygen. This trait is crucial for its metabolic processes, as it relies on anaerobic respiration to survive and grow. Dethiobacter alkaliphilus has a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in specific ecological niches. The organism is cataloged under the accession number ACJM00000000.1, which serves as a reference for its genetic sequence and related studies. This accession provides a basis for further research into its metabolic pathways and potential applications in bioremediation or industrial microbiology. Understanding the ecological role of Dethiobacter alkaliphilus AHT 1 is essential, as its anaerobic lifestyle likely positions it within specialized environments where oxygen levels are minimal. Such habitats may include deep-sea sediments, anoxic layers of water bodies, or other extreme habitats. The presence of Dethiobacter alkaliphilus AHT 1 in these environments suggests a significant role in the cycling of carbon and nutrients, particularly in the degradation of organic matter under anaerobic conditions. This highlights the importance of anaerobic microorganisms in maintaining ecosystem balance and facilitating biogeochemical processes in various ecological settings.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassDethiobacteria
OrderDethiobacterales
FamilyDethiobacteraceae
GenusDethiobacter
SpeciesDethiobacter alkaliphilus
StrainAHT 1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dethiobacter alkaliphilus AHT 1 ctg20, whole genome shotgun

Gene Summary

Adenine Count

805454 bp

Thymine Count

800938 bp

Guanine Count

753157 bp

Cytosine Count

757196 bp

Genome Length

3116746 bp

Protein-coding Genes

3163 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiazole biosynthesis family proteinDealDRAFT_0835A5N8P8Negative818265 - 81902927029.8
thiamine biosynthesis protein thifDealDRAFT_0836P51335Negative819032 - 81983829530.9
thiamine biosynthesis protein thisDealDRAFT_0837Not AvailableNegative819840 - 8200346988.42
hydrogenase expression/formation protein hypeDealDRAFT_0838P40595Negative820363 - 82136435040.4
hydrogenase formation hypd proteinDealDRAFT_0839P31882Negative821361 - 82244038663.7
hydrogenase assembly chaperone hypc/hupfDealDRAFT_0840Not AvailableNegative822433 - 8226517903.71
(nife) hydrogenase maturation protein hypfDealDRAFT_0841Q02987Negative822651 - 82494283691.6
hydrogenase accessory protein hypbDealDRAFT_0842Q43949Negative824914 - 82561825489.8
hypothetical proteinDealDRAFT_0843Not AvailableNegative825599 - 8258659818.57
hydrogenase maturation proteaseDealDRAFT_0844Not AvailableNegative825878 - 82635716350.0

Displaying genes 841 – 850 of 3209 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

166 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 166 metabolites

Health Effects

No health effects information available for this bacterium.