Abiotrophia defectiva ATCC 49176

microaerophile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Aerococcaceae

Genus

Abiotrophia

Description

Abiotrophia defectiva ATCC 49176 is a microaerophilic bacterium, meaning it requires reduced levels of oxygen for optimal growth. This characteristic places it in a specific ecological niche where oxygen concentration is lower than that found in the atmosphere. The organism possesses two replicons, which can suggest a degree of genetic complexity or adaptability. The strain's genetic information is accessible through the following accession numbers: ACIN00000000.3 and NZ_ACIN00000000, which indicate that its genomic data has been sequenced and made available for further research. This data can facilitate studies on its metabolic pathways, pathogenic potential, and responses to environmental changes. As a microaerophile, Abiotrophia defectiva may play a role in specific environments where oxygen levels are limited, such as in certain human body sites or in particular ecological habitats. Its unique oxygen requirement and genetic characteristics could contribute to its survival and persistence in such conditions, potentially influencing microbial community dynamics. Understanding these traits could provide insights into its ecological interactions and its role in health and disease, particularly in relation to its pathogenicity in humans.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyAerococcaceae
GenusAbiotrophia
SpeciesAbiotrophia defectiva
StrainATCC 49176

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Abiotrophia defectiva ATCC 49176
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abiotrophia defectiva ATCC 49176 A_defectiva-1.0.1_Cont3.2, whole

Gene Summary

Adenine Count

539931 bp

Thymine Count

542628 bp

Guanine Count

468933 bp

Cytosine Count

490347 bp

Genome Length

2041839 bp

Protein-coding Genes

1917 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trehalose operon repressorGCWU000182_001970Not AvailableNegative2000654 - 200137328020.8
hypothetical proteinGCWU000182_001971Not AvailableNegative2001449 - 200264243808.4
putative oligo-1,6-glucosidaseGCWU000182_001972Not AvailableNegative2002756 - 200441763189.1
pts system trehalose-specific iibc componentGCWU000182_001973Not AvailableNegative2004474 - 200598554770.3
r3h domain proteinGCWU000182_001974Not AvailableNegative2006164 - 200697629629.2
putative stage iii sporulation protein jGCWU000182_001975Not AvailableNegative2007004 - 200780429959.2
ribonuclease p protein componentGCWU000182_001976Not AvailableNegative2007835 - 200818213710.7
yodaGCWU000182_001977Not AvailablePositive2008403 - 200905024634.7
abc transporter, atp-binding proteinGCWU000182_001978Not AvailableNegative2009103 - 201068959481.8
dna-binding helix-turn-helix proteinGCWU000182_001979Not AvailablePositive2010815 - 201167533633.2

Displaying genes 1971 – 1980 of 2011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

269 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da

Displaying 1–10 of 269 metabolites

Health Effects

No health effects information available for this bacterium.