Ruminococcus sp. 5_1_39BFAA

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. 5_1_39BFAA is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is part of the Ruminococcus genus, which is known to play a significant role in the fermentation of dietary fibers in the gastrointestinal tract, particularly in ruminant animals. The strain possesses a single replicon, indicating that it has a streamlined genomic architecture that may contribute to its adaptability and efficiency in nutrient utilization. The accession number for this strain is ACII00000000.2, which is a unique identifier that allows for its genetic and taxonomic classification within databases. Ruminococcus spp. are typically involved in the breakdown of complex carbohydrates, which not only aids in the host's digestion but also influences the overall microbial community structure in the gut. This can have implications for host health, nutrition, and even metabolic processes. The flagella presence suggests motility, which may enhance its ability to colonize and thrive in the gut environment, where competition for resources is intense. Overall, Ruminococcus sp. 5_1_39BFAA exemplifies the intricate dynamics of gut microbiota, highlighting the importance of specific microorganisms in maintaining gut health and influencing the broader ecological interactions within the digestive system.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. 5_1_39BFAA
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. 5_1_39BFAA
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. 5_1_39BFAA


Gene Summary

Adenine Count

1105299 bp

Thymine Count

1200000 bp

Guanine Count

738969 bp

Cytosine Count

886431 bp

Genome Length

3930699 bp

Protein-coding Genes

3464 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Recombination exonucleaseRSAG_01176Not AvailablePositive2481434 - 2485261144191.0
Hypothetical proteinRSAG_04664Not AvailablePositive2485272 - 248573918316.2
hypothetical proteinRSAG_04665Not AvailablePositive2485844 - 248623315199.1
N-6 dna methylaseRSAG_04666Not AvailablePositive2486310 - 248705028324.0
hypothetical proteinRSAG_01173Not AvailablePositive2487035 - 248779628661.4
Hypothetical proteinRSAG_01172Not AvailablePositive2487808 - 248997085229.9
Putative resolvase/integraseRSAG_01171Not AvailablePositive2489970 - 24901647495.06
hypothetical proteinRSAG_01170Not AvailablePositive2490164 - 24903888834.63
hypothetical proteinRSAG_01169Not AvailablePositive2490402 - 249067410239.5
Holliday junction resolvase recuRSAG_01168Not AvailablePositive2490661 - 249098712462.8

Displaying genes 31 – 40 of 3589 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

350 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 350 metabolites

Health Effects

No health effects information available for this bacterium.