Ruminococcus sp. 5_1_39BFAA

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. 5_1_39BFAA is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is part of the Ruminococcus genus, which is known to play a significant role in the fermentation of dietary fibers in the gastrointestinal tract, particularly in ruminant animals. The strain possesses a single replicon, indicating that it has a streamlined genomic architecture that may contribute to its adaptability and efficiency in nutrient utilization. The accession number for this strain is ACII00000000.2, which is a unique identifier that allows for its genetic and taxonomic classification within databases. Ruminococcus spp. are typically involved in the breakdown of complex carbohydrates, which not only aids in the host's digestion but also influences the overall microbial community structure in the gut. This can have implications for host health, nutrition, and even metabolic processes. The flagella presence suggests motility, which may enhance its ability to colonize and thrive in the gut environment, where competition for resources is intense. Overall, Ruminococcus sp. 5_1_39BFAA exemplifies the intricate dynamics of gut microbiota, highlighting the importance of specific microorganisms in maintaining gut health and influencing the broader ecological interactions within the digestive system.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. 5_1_39BFAA
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. 5_1_39BFAA
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. 5_1_39BFAA acpfZ-supercont2.3, whole genome

Gene Summary

Adenine Count

1105299 bp

Thymine Count

1200000 bp

Guanine Count

738969 bp

Cytosine Count

886431 bp

Genome Length

3930699 bp

Protein-coding Genes

3464 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
argininosuccinate synthaseRSAG_02188Not AvailablePositive1524502 - 152572845413.4
hypothetical proteinRSAG_02189Not AvailableNegative1525874 - 152624814296.5
hypothetical proteinRSAG_02190Not AvailableNegative1526412 - 152756042560.4
guanine deaminaseRSAG_02191Not AvailablePositive1528239 - 152951647391.4
hypothetical proteinRSAG_02192Not AvailablePositive1529679 - 153105548788.1
hypothetical proteinRSAG_02193Not AvailablePositive1531355 - 153229633502.4
hypothetical proteinRSAG_02194Not AvailableNegative1532613 - 153299314106.0
purine nucleoside phosphorylaseRSAG_02195Not AvailableNegative1533080 - 153378425428.7
hypothetical proteinRSAG_02196Not AvailableNegative1533823 - 153458728962.1
Trna-leuNot AvailableNot AvailablePositive1534686 - 1534766Not Available

Displaying genes 1471 – 1480 of 3589 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

350 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 350 metabolites

Health Effects

No health effects information available for this bacterium.