Campylobacter rectus RM3267

microaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter rectus RM3267 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement, meaning it thrives in environments with lower oxygen concentrations than are typically found in the atmosphere. This trait is significant as it influences the bacterium's habitat and ecological role, as microaerophilic organisms are often found in environments such as the gastrointestinal tracts of animals, where oxygen levels are reduced. The genome of C. rectus RM3267 is represented by one replicon, suggesting a streamlined genetic organization that is typical for many bacteria within the Campylobacter genus. This can contribute to its adaptability and potential pathogenicity, as a simpler genome may facilitate quicker responses to environmental changes. The genetic material of Campylobacter rectus RM3267 is cataloged under the accession number ACFU00000000.1, providing a reference for researchers interested in studying its genetic characteristics, evolutionary relationships, and possible implications in health and disease. Understanding the traits of Campylobacter rectus RM3267 provides insight into its ecological niche and potential interactions within microbial communities, particularly in the context of the oral cavity or gastrointestinal systems of hosts. Its microaerophilic nature suggests a specialized role in these environments, potentially influencing host health and the dynamics of microbial populations.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter rectus
StrainRM3267

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter rectus RM3267
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophilic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter rectus RM3267 contig00098, whole genome shotgun

Gene Summary

Adenine Count

693153 bp

Thymine Count

692842 bp

Guanine Count

566453 bp

Cytosine Count

560658 bp

Genome Length

2513107 bp

Protein-coding Genes

2966 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-aspartyl peptidaseCAMRE0001_1672P39377Positive510640 - 51180641873.7
hypothetical proteinCAMRE0001_1674Not AvailableNegative511819 - 5119775711.9
hypothetical proteinCAMRE0001_1673Not AvailablePositive511952 - 5121105938.24
ribosomal protein s2CAMRE0001_1675A7ZF28Positive512418 - 51321830059.3
translation elongation factor tsCAMRE0001_1676A7ZF27Positive513218 - 51428239192.0
abc transporter, atp-binding proteinCAMRE0001_1677Q1RK34Positive514288 - 51494423997.0
sel1 repeat proteinCAMRE0001_1678Not AvailablePositive515329 - 51593722454.9
hypothetical proteinCAMRE0001_1679Not AvailableNegative516077 - 5161904395.45
flagellar biosynthetic protein flirCAMRE0001_1680P35537Positive516271 - 51703227918.4
hypothetical proteinCAMRE0001_1681Not AvailablePositive517100 - 51870159920.4

Displaying genes 641 – 650 of 3014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

555 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 555 metabolites

Health Effects

No health effects information available for this bacterium.