Campylobacter rectus RM3267

microaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter rectus RM3267 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement, meaning it thrives in environments with lower oxygen concentrations than are typically found in the atmosphere. This trait is significant as it influences the bacterium's habitat and ecological role, as microaerophilic organisms are often found in environments such as the gastrointestinal tracts of animals, where oxygen levels are reduced. The genome of C. rectus RM3267 is represented by one replicon, suggesting a streamlined genetic organization that is typical for many bacteria within the Campylobacter genus. This can contribute to its adaptability and potential pathogenicity, as a simpler genome may facilitate quicker responses to environmental changes. The genetic material of Campylobacter rectus RM3267 is cataloged under the accession number ACFU00000000.1, providing a reference for researchers interested in studying its genetic characteristics, evolutionary relationships, and possible implications in health and disease. Understanding the traits of Campylobacter rectus RM3267 provides insight into its ecological niche and potential interactions within microbial communities, particularly in the context of the oral cavity or gastrointestinal systems of hosts. Its microaerophilic nature suggests a specialized role in these environments, potentially influencing host health and the dynamics of microbial populations.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter rectus
StrainRM3267

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter rectus RM3267
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophilic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter rectus RM3267 contig00098, whole genome shotgun

Gene Summary

Adenine Count

693153 bp

Thymine Count

692842 bp

Guanine Count

566453 bp

Cytosine Count

560658 bp

Genome Length

2513107 bp

Protein-coding Genes

2966 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase, alpha subunitCAMRE0001_0183A7H0Y9Negative76074 - 7706036248.4
ribosomal protein s4CAMRE0001_0184A7H0Z0Negative77102 - 7772823937.2
30s ribosomal protein s11CAMRE0001_0185A7H0Z1Negative77751 - 7814313846.0
30s ribosomal protein s13CAMRE0001_0186A7ZFZ0Negative78153 - 7852113747.8
translation initiation factor if-1CAMRE0001_0187A7H0Z3Negative78795 - 790138303.34
methionine aminopeptidase, type iCAMRE0001_0188P56102Negative79139 - 7989727629.6
preprotein translocase, secy subunitCAMRE0001_0189Q9ZJS9Negative79897 - 8108743244.0
ribosomal protein l15CAMRE0001_0190A7H0Z4Negative81159 - 8156014355.5
ribosomal protein s5CAMRE0001_0191A7H0Z5Negative81570 - 8201315900.5
ribosomal protein l18CAMRE0001_0192A7ZFZ6Negative82025 - 8238112966.2

Displaying genes 121 – 130 of 3014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

555 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 555 metabolites

Health Effects

No health effects information available for this bacterium.