Eikenella corrodens ATCC 23834

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens ATCC 23834 is a Gram-negative, facultative anaerobic bacterium characterized by its ability to thrive in both aerobic and anaerobic environments. This species is part of the normal flora of the human oral cavity and gastrointestinal tract, suggesting its role in maintaining microbial homeostasis within these habitats. The facultative anaerobic nature of E. corrodens allows it to adapt to varying oxygen levels, potentially contributing to its survival and growth in diverse environments, including those encountered during human infections. Eikenella corrodens is typically associated with human bites and certain types of periodontal diseases, indicating its opportunistic nature under specific conditions. Its metabolic versatility may facilitate its survival in the dynamic and often competitive microbial environments of the oral cavity, where it can engage in complex interactions with other microbial species. Interestingly, the presence of Eikenella corrodens in human-associated niches underscores its potential as a marker for the microbial dynamics of the oral and gastrointestinal microbiomes. Its ability to thrive in both oxygen-rich and hypoxic conditions may offer insights into microbial resilience and adaptation strategies in response to environmental stressors, contributing to our understanding of microbial ecology in human health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens ATCC 23834

Accession NumberACEA00000000.1

Gene Summary

Adenine Count

476954 bp

Thymine Count

466557 bp

Guanine Count

586797 bp

Cytosine Count

605047 bp

Genome Length

2135355 bp

Protein-coding Genes

2593 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+119754 - 119767Not Available
Putative tail length tape measure proteinEIKCOROL_00158Not Available+131931 - 13239515827.7
Tail proteinEIKCOROL_00159Not Available+132399 - 13285416308.7
Tail proteinEIKCOROL_00160P21679+132857 - 13407745004.0
Hypothetical proteinEIKCOROL_00161Q57519-134103 - 13534144588.3
Hypothetical proteinEIKCOROL_00162Not Available-135363 - 13566211608.8
hypothetical proteinEIKCOROL_00163Not Available-135669 - 1359389784.75
C repressorEIKCOROL_00164P44207-135966 - 13660122956.5
hypothetical proteinEIKCOROL_00165Not Available+136763 - 1369727322.8
hypothetical proteinEIKCOROL_00166Not Available+137017 - 13752918871.9

Displaying genes 1 – 10 of 2678 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

458 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002655octadecanoyl-CoAC39H66N7O17P3SChemical structure of octadecanoyl-CoANot available
Average1029.97Da
Monoisotopic1029.347070181Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da

Displaying 41–50 of 458 metabolites