Eikenella corrodens ATCC 23834

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens ATCC 23834 is a gram-negative, facultative anaerobic bacterium characterized by its rod shape. This organism is part of the normal flora of the human mouth and gastrointestinal tract, indicating its ecological role in maintaining microbial balance within these environments. With a single replicon, Eikenella corrodens ATCC 23834 has a streamlined genetic structure that may contribute to its adaptability in various oxygen conditions. Its facultative anaerobic nature allows it to thrive in both oxygen-rich and oxygen-poor environments, making it versatile in colonizing different niches within the human body. The accession number for this strain is ACEA00000000.1, which provides a reference for genomic studies and further research. Eikenella corrodens is often associated with human infections, particularly in cases involving human bites or clenched fist injuries, where its presence can lead to significant clinical implications. The ecological insight derived from the traits of Eikenella corrodens ATCC 23834 underscores its dual role as a commensal organism and a potential pathogen. This highlights the importance of maintaining microbial diversity within the human microbiome, as disruptions can lead to opportunistic infections. Understanding the characteristics and behaviors of such organisms can aid in the development of better therapeutic strategies and infection management approaches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainATCC 23834

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Eikenella corrodens ATCC 23834
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens ATCC 23834 E_corrodens-1.0_Cont37.1, whole

Gene Summary

Adenine Count

476954 bp

Thymine Count

466557 bp

Guanine Count

586797 bp

Cytosine Count

605047 bp

Genome Length

2135355 bp

Protein-coding Genes

2593 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEIKCOROL_02571Not AvailablePositive2045496 - 20456786790.26
hypothetical proteinEIKCOROL_02572Not AvailablePositive2045726 - 204609412632.8
hydrolase, alpha/beta domain proteinEIKCOROL_02573P76092Negative2046143 - 204788565569.6
hypothetical proteinEIKCOROL_02574Not AvailableNegative2047966 - 204858923639.9
hypothetical proteinEIKCOROL_02575Not AvailableNegative2048678 - 204908515299.2
cdp-alcohol phosphatidyltransferaseEIKCOROL_02576P76090Negative2049096 - 204969521838.1
hypothetical proteinEIKCOROL_02577Not AvailablePositive2050011 - 205037613422.5
hypothetical proteinEIKCOROL_02578Not AvailableNegative2050570 - 20507105326.43
export membrane protein secfEIKCOROL_02579E9RGS4Negative2050765 - 205170634594.8
export membrane protein secdEIKCOROL_02580E9RGS3Negative2051708 - 205354066277.3

Displaying genes 2571 – 2580 of 2678 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

670 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 670 metabolites

Health Effects

No health effects information available for this bacterium.