Luminiphilus syltensis NOR5-1B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Halieaceae

Genus

Luminiphilus

Description

Luminiphilus syltensis NOR5-1B is characterized by having a single replicon, which is significant in understanding its genomic structure and stability. The organism is cataloged under the accession number ACCY00000000.1, providing a reference point for researchers interested in studying its genetic makeup and related traits. As a member of the genus Luminiphilus, this bacterium is presumed to inhabit specific ecological niches, although specific habitat details are not provided. The single replicon trait may suggest a streamlined genetic organization, which can impact its metabolic capabilities and adaptability to environmental conditions. In summary, the genomic simplicity of Luminiphilus syltensis NOR5-1B, indicated by its single replicon, may play a crucial role in its ecological interactions and evolutionary strategies. Understanding this bacterium's biology could shed light on its ecological role and potential applications in biotechnology or environmental microbiology, though further research would be required to explore these aspects fully.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyHalieaceae
GenusLuminiphilus
SpeciesLuminiphilus syltensis
StrainNOR5-1B

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Luminiphilus syltensis NOR5-1B ctg_1109846220896, whole genome

Gene Summary

Adenine Count

702385 bp

Thymine Count

702598 bp

Guanine Count

921271 bp

Cytosine Count

921339 bp

Genome Length

3247593 bp

Protein-coding Genes

2883 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein [luminiphilus syltensis]-Not AvailablePositive1879831 - 188034018215.8
dead/deah box helicase [pseudohaliea rubra]-P9WH04Positive1880510 - 188230665948.2
universal stress protein [luminiphilus syltensis]-Not AvailableNegative1882418 - 188328131984.2
stas domain-containing protein [bremerella volcania]-P55189Negative1883293 - 188477452957.6
deda family protein [luminiphilus syltensis]-Not AvailableNegative1885008 - 188543015674.5
acyl-coa dehydrogenase [luminiphilus syltensis]-Q8ZBY6Negative1885738 - 188837796054.6
atp-grasp domain-containing protein [hydrogenovibrio halophilus]-Not AvailablePositive1888513 - 188975147555.4
hypothetical protein [luminiphilus syltensis]-Not AvailablePositive1889781 - 189181774755.6
hypothetical protein [luminiphilus syltensis]-Not AvailablePositive1892260 - 189316834649.3
alpha-ketoglutarate-dependent dioxygenase alkb [luminiphilus syltensis]-Q58DM4Positive1893280 - 189390923743.1

Displaying genes 1701 – 1710 of 2925 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

264 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 264 metabolites

Health Effects

No health effects information available for this bacterium.